Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015934306.1_cds_XP_016480418.1_71857
CDS Infomation

[gene=LOC107801586] [db_xref=GeneID:107801586] [protein=flap endonuclease GEN-like 1 isoform X2] [protein_id=XP_016480418.1] [location=complement(join(11295..11528,11636..12105,12676..12805,12906..13152,13273..13454,14113..14283,15040..15216,15610..15804))] [gbkey=CDS]
Sequence

ATGGGGGTGGGTGGAAACTTCTGGGAATTGCTGAAACCGTATCGTCGAGCAGAAGGGTTT
GATTTCTTGAGAAACAAACGTGTAGCAGTGGACTTGTCATATTGGATTGTTCAGCAAGAA
ACTGCAGTCAAAGCCCACATTCGTAATCCTCATATCAGACTCACTTTTTTCCGTACCATC
AATCTCTTCTCTAAGTTTGGGGCATTTCCTGTTTTCGTCGTGGATGGTACTGCGTCACCG
CTTAAGTCCCAGGCAAGGATTGCACGTTTTTTTCGGGCATCAGGAATTGATCTATCGAGT
TTGCCTTTGGCTGAGGAGGGCATTTCAATTGAGAGGAACAAGGCATTTCAGAAATGCGAA
CAAGAATGTGTGGAGCTTCTTGAACTACTTGGGGTGTCAGTCCTAAAGGCAAAAGGAGAA
GCTGAAGCACTCTGTGCACAGTTGAATCAAGAAGGACAAGTTGATGCTTGTATTACTGCT
GATAGCGATGCATTTCTTTTTGGAGCCAAATGTGTTATCAAAAATATCCAACCCAACTCC
AAAGAACCATTTGAGTGCTATCACATGTCGGATATTGAGTCTGGTCTTGGGCTGCGGAGA
AATCACTTGATAGCAATTTCACTTTTGGTGGGAAATGACCACAACTTGATTGGTGTCCCT
GGGATTGGGCTTGAAACAGCACTTCGTTTTGTCAAATCTTTCAGTGAAGATGAGATCTTG
TATAGGTTGCAGGAAATAGGTGGAGGGGATGTACAGGTGCTTCAGCGTGATGTCAACTTA
GACTGTAATTTTATACCCAGTTCAGATGAGAGCCCTCAGAAGACCAAAGTGCGACACTGT
TCATTCTGTGGGCATCCTGGCAGCAAGAAAGCTCACCTCAAGTTTGCTTGTCAGTATTGC
AGTTCCAATGCCGACGAGGGTTGCATTCAGAAACCGTCGGGCTTCAAGTGTAATTGTTCC
TCGTGTGATTTGGATAATAAAGAAAAAGAACAGAAAAGAAATGAGAATTGGCAGATTAAA
GTTTGCAGAATGATCACCTCGGAGCAGAATTTCCCAAACAATGAGATTACAGAAATGTAC
TTGAACAAACACCAGCAGTCTGATGGTGATTATCATTTAACATGGTCAAGTCCAAAGACA
GATATGCTAGTTGATTATCTGGCTTATTATCAGCACTGGGAGCCATCTTATACACGACAA
AGAATGCTTCCTATGTTATCCACCATATTTCTAAGAGACGTGGCCTCAAATTCAAAAGAT
CAATTGTTATGCGGACAGTATGAATTTGATTCCATTCAGCGGGTAAAGACAAGATTTGGA
CATCAACTTTACGTAATCAATTGGAAGAAAACGACACGTGAAATGAGCAATGAAATCTGC
ATCCCCTCTGAAAACCCTGATACGGAGCAGGAGCTGAGGATAGCTGATGATGAGTCGAAA
GATTTGCTCGATGAGCCTGAGGTTCTGCAGATTCATATCAAGGACGGATGCAGCTTTTTA
TCAACTGAAGAAGATATGGAGCTTGTACAGAGTGCTTTTCCAGAAAAGGTTTCCCAGTTC
TTGAGAGATAAGGAGCTAAAAGAAACAAAATCAAGTAGAAAAAGATCAGTGAAGCCTGAA
AATTCAGAATCACCGAGAGGCGTTCAACCCAGCATCACCAACTTCTACCGATCATCCAAA
GTCCAGGTGACGCCTGGGAATGAAACTGGAAGTTCAAAGATTAGTGCGGATACTTCTGGA
GAGAGAGATAAAGAACCCATCCGAAACTACTCCAAGTCTGCTAGACGCAAGCTTTTGTTT
GGTTAG

Peptide Sequence

PEP ID

XP_016480418.1
PEP Infomation

PREDICTED: flap endonuclease GEN-like 1 isoform X2 [Nicotiana tabacum]
Sequence

MGVGGNFWELLKPYRRAEGFDFLRNKRVAVDLSYWIVQQETAVKAHIRNPHIRLTFFRTI
NLFSKFGAFPVFVVDGTASPLKSQARIARFFRASGIDLSSLPLAEEGISIERNKAFQKCE
QECVELLELLGVSVLKAKGEAEALCAQLNQEGQVDACITADSDAFLFGAKCVIKNIQPNS
KEPFECYHMSDIESGLGLRRNHLIAISLLVGNDHNLIGVPGIGLETALRFVKSFSEDEIL
YRLQEIGGGDVQVLQRDVNLDCNFIPSSDESPQKTKVRHCSFCGHPGSKKAHLKFACQYC
SSNADEGCIQKPSGFKCNCSSCDLDNKEKEQKRNENWQIKVCRMITSEQNFPNNEITEMY
LNKHQQSDGDYHLTWSSPKTDMLVDYLAYYQHWEPSYTRQRMLPMLSTIFLRDVASNSKD
QLLCGQYEFDSIQRVKTRFGHQLYVINWKKTTREMSNEICIPSENPDTEQELRIADDESK
DLLDEPEVLQIHIKDGCSFLSTEEDMELVQSAFPEKVSQFLRDKELKETKSSRKRSVKPE
NSESPRGVQPSITNFYRSSKVQVTPGNETGSSKISADTSGERDKEPIRNYSKSARRKLLF
G

Transcript Sequence

Gene sequence data has not been registered.